Insertion junction: CLIP2.004010_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004010
Chromosome:chromosome 12
Location:1654957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486600 MEX1 (1 of 1) PTHR34809//PTHR34809:SF1 - FAMILY NOT NAMED // MALTOSE EXCESS PROTEIN 1, CHLOROPLASTIC-RELATED; Maltose exporter-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCACACACTCACTCATGCACGCACGCACGCACGCCCCTGCAGGTCC
Internal bar code:TAGCTGTCAAGGACCTATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3780
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGAACAGCCAGGGGTC
Suggested primer 2:CAATTGACGTGCCGTGTTGT