Insertion junction: CLIP2.004011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004011
Chromosome:chromosome 3
Location:5000638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179650 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCCAGAGAGTACGTCAGGCCGACCCAGGGTCGTTTTCAAAGGTCCAT
Internal bar code:GAGCTGGTGGAGCGTATCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGATAGGGGGAGGGAG
Suggested primer 2:CTCTGAGCCCCAGTCCAAAG