Insertion junction: CLIP2.004018_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004018
Chromosome:chromosome 12
Location:3865973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGATGGAACATGGCAAGGGGCAGGAAAGCGTAGTCCCGATGTGTGTGG
Internal bar code:TAGAGAATGCGTGCGTACGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3649
LEAP-Seq percent confirming:18.5714
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:TCCGGTGGATAGGTACTGCA