Insertion junction: CLIP2.004022_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004022
Chromosome:chromosome 4
Location:1416955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214250 AGO2 Argonaute-like protein; (1 of 3) PTHR22891:SF0 - PROTEIN ARGONAUTE-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACAGCAGGCGCGTCGTTAGGTGGGGTTGTAGTTACCAGCCGTAACCA
Internal bar code:TTTAAGACGGGTGACAGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTATGTGCGTGCTG
Suggested primer 2:GCTGCAAAGATGGTTGGCAA