Insertion junction: CLIP2.004024_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004024
Chromosome:chromosome 9
Location:210032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386743 (1 of 1) 2.1.1.305 - 8-demethyl-8-alpha-L-rhamnosyl tetracenomycin-C 2'-O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGAGAGACAAATGGTGATGAGTCGTCGTAGATAGCAATCCGGGTAG
Internal bar code:ACGATTCCTCAGCAAGCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATATCCGCCTGCCTTCTCG
Suggested primer 2:GGGCAAGTTGACGTTTGGTC