Insertion junction: CLIP2.004029_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004029
Chromosome:chromosome 9
Location:5741971
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g410700 MDN5,MDH5 (1 of 1) 1.1.1.82 - Malate dehydrogenase (NADP(+)) / NADP-linked malate dehydrogenase; NADP-Malate Dehydrogenase 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCGGAACCACTTCATGTCACGGATCACGTCGGGGGCGGGCAGGCCG
Internal bar code:TTTGCTGAAAGGTGCCTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTGGCGAAAGGGGGTTA
Suggested primer 2:TCCAAACACTACCGCACTCC