Insertion junction: CLIP2.004030_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004030
Chromosome:chromosome 10
Location:1727413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAGCCCGCTCGATGGCCTCCACGGCCTCCGAGAACTTCTTCTGCTTC
Internal bar code:AAGGATAATTTAGACAGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTTGCTGGGTAGTGCT
Suggested primer 2:CGTTGCAGTGCCATTATCGG