Insertion junction: CLIP2.004032_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004032
Chromosome:chromosome 10
Location:6425105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464650 CGL36 (1 of 1) PF12646 - Domain of unknown function (DUF3783) (DUF3783); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACAAGCTAGACAAGGCGACAAACACACGGCATCCGTTACGCAGCCG
Internal bar code:GAGTGCTTATTCGCTGGCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3402
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGACGGAAACCCAACG
Suggested primer 2:TCAGGTACCCGACAAGCAAC