Insertion junction: CLIP2.004038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004038
Chromosome:chromosome 7
Location:6098109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355466 AGE2 DNA repair glycosylase; (1 of 1) PF15628 - RRM in Demeter (RRM_DME) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGACCAAGAATTGTGTGTGTATGCGTGTGTGTCTGGGGGGGTTGTAAA
Internal bar code:GTTAGTCCGACACAGGTCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1743
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTCCTGCTAATGCGCCT
Suggested primer 2:CTCTAGAGCTACTGCCGCAC