Insertion junction: CLIP2.004040_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004040
Chromosome:chromosome 8
Location:3982386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382515 (1 of 1) PTHR22838//PTHR22838:SF0 - WD REPEAT PROTEIN 26-RELATED // WD REPEAT-CONTAINING PROTEIN 26 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGCAACCCACATCCCCCTCGCTCGTTTTGGTTGGTTTTGGTTTAG
Internal bar code:ACGGTTCTACTAGTTTCGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCAGCATGTAAGGGTT
Suggested primer 2:CAGCACGGAACCAATGCAAA