Insertion junction: CLIP2.004041_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004041
Chromosome:chromosome 2
Location:6318057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTACAGCTATGCCTGCGCAGTTCAGGCCGAGCTGGCGGCACAGCTCAA
Internal bar code:ATCGGCATCAAGAGATTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACGCCATTCCCTCTT
Suggested primer 2:TATTAAGCGCCCGACCGTAC