Insertion junction: CLIP2.004041_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004041
Chromosome:chromosome 2
Location:6318071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCAGCCGCGGTCGAAGTCCGGCCGCAGCCGCACCGCGTGCCGGAAC
Internal bar code:ATCGGCATCAAGAGATTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TATTAAGCGCCCGACCGTAC
Suggested primer 2:CCTTCACGCCATTCCCTCTT