Insertion junction: CLIP2.004043_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004043
Chromosome:chromosome 7
Location:4694050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345050 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTCAACACCTCACAACCAGTACCAAATTGCCGCACGTCATGCGCTA
Internal bar code:TATACAGGCCCGTATGGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTGTTTCATGTGTGTT
Suggested primer 2:TGTGGTTGAGCGCAAATGTG