Insertion junction: CLIP2.004048_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004048
Chromosome:chromosome 12
Location:2878436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502900 (1 of 3) 3.4.24.13 - IgA-specific metalloendopeptidase / Immunoglobulin A1 proteinase outside_mRNA
Cre12.g502950 CPL15 RNA-binding S4 domain-containing protein; (1 of 1) IPR002942//IPR017506 - RNA-binding S4 domain // Photosystem II S4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCATAAATATGTCTCAGCGCCTAGGCGCGCGCGCGGCCATGCTCTG
Internal bar code:CACTCCTTTTATTGCTCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4826
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGCGGACAAAGATTGGA
Suggested primer 2:GCCGCACCACCATTCTTTTT