Insertion junction: CLIP2.004048_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004048
Chromosome:chromosome 12
Location:2878443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502900 (1 of 3) 3.4.24.13 - IgA-specific metalloendopeptidase / Immunoglobulin A1 proteinase outside_mRNA
Cre12.g502950 CPL15 RNA-binding S4 domain-containing protein; (1 of 1) IPR002942//IPR017506 - RNA-binding S4 domain // Photosystem II S4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAATCTGACGTATGCTTACACACATGAATACCGTCCGCCTTCCGGT
Internal bar code:CACTCCTTTTATTGCTCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1997
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCACCACCATTCTTTTT
Suggested primer 2:TGTCGCGGACAAAGATTGGA