Insertion junction: CLIP2.004052_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004052
Chromosome:chromosome 2
Location:5383728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800236 (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTTGCCATGTGCTGGGGTCTGGGAATCAGCAATCTGCACCCTACGGG
Internal bar code:CGGTGAGGGGAAATGGCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGGACCATGGTATGA
Suggested primer 2:GGATCCGATGCACGTGATCT