Insertion junction: CLIP2.004052_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004052
Chromosome:chromosome 2
Location:5383756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800236 (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGCCGGAGTTACTAAACGACAAGTTGCTTGCTTGCTGGAAGTCAGCT
Internal bar code:CCAACCAGTGTCAAACATCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2779
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCCGATGCACGTGATCT
Suggested primer 2:GTGCGTGGACCATGGTATGA