Insertion junction: CLIP2.004052_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004052
Chromosome:chromosome 12
Location:654809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493300 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGGCCGTACGCTTAACAACCACCGCTGCTGCCGTTCCCCCACTTG
Internal bar code:AAGCGATATGTGCCTCCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGCGACCGTACATGGA
Suggested primer 2:AGACAAACTTGTTCGCGCAC