Insertion junction: CLIP2.004054_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004054
Chromosome:chromosome 3
Location:4946907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATCATACTACATAAGCATATGCAGAAGGGAAAACAAGTCGCGTGAAA
Internal bar code:GGAAGTTTGGGAGCTGTGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3587
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCAACGCTACATCAGAG
Suggested primer 2:TTGGCACATGAGCAAGTTGC