Insertion junction: CLIP2.004055_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004055
Chromosome:chromosome 10
Location:660949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422000 TMG6,TRM1 (1 of 1) PTHR10631:SF3 - TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE; tRNA (guanine-N2)-methyltransferase 3'UTR
Cre10.g422050 (1 of 1) PTHR22763:SF3 - E3 UBIQUITIN-PROTEIN LIGASE RNF115 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCTTCAGCACCAACCCGCACATGCCAACATGCTCTGTAAGCCAGTC
Internal bar code:GTTGAGACATGGGATGATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCCCTATGTGTGCTCT
Suggested primer 2:CAAAGCGTCTTTTGCGGTCA