Insertion junction: CLIP2.004060_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004060
Chromosome:chromosome 9
Location:5638188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410050 putative Cation-transporting ATPase; (1 of 2) PF00122//PF00689//PF00690//PF13246 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // Cation transport ATPase (P-type) (Cation_ATPase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTAATAGTTATTAATGGCCCCGGCTTCCCGAAAATAAATATCAACAG
Internal bar code:GAGGCATCGGAGAAAAAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGAGATTTTCGAGCTTG
Suggested primer 2:CCCAAGTACCTTGATGGCGT