Insertion junction: CLIP2.004061_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004061
Chromosome:chromosome 10
Location:5617078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458550 STIC2 Chloroplast protein biogenesis factor; (1 of 1) PTHR33449:SF1 - NUCLEOID-ASSOCIATED PROTEIN YBAB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTACACTCGTGTCGAGAAGGTGCCTACGCGTGCTGCTGGAAATAAT
Internal bar code:GTCATGCTTCTCAGCAGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4884
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACGTAGTTTGGAGGACA
Suggested primer 2:TGCAGGGCATGAAGGAGAAG