Insertion junction: CLIP2.004063_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004063
Chromosome:chromosome 1
Location:5552278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039550 PLAP1,PLP1 Plastid lipid associated protein 1; (1 of 230) IPR017986 - WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTGCCAGGCTCAGAAGGTGATGAGTGCGCCGCTGTCGCACAGGCGC
Internal bar code:TATATGTTACTTCGATAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4148
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCGGACGAAATTTAGGA
Suggested primer 2:TTTCCGTGCACCTGGTAGTC