Insertion junction: CLIP2.004065_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004065
Chromosome:chromosome 6
Location:1918788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264350 PRPL13 (1 of 1) PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC; Chloroplast ribosomal protein L13 3'UTR
Cre06.g264400 (1 of 1) PTHR13992:SF7 - SMRTER, ISOFORM G 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGTGAGGCTGGCGCGTTGTCGAGTGCCGTATCGGCTTTGCAGGGCAC
Internal bar code:TGTGTTCATTTGACCCTTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCATTGCGTGTTTCCTGT
Suggested primer 2:GCAGCAACATACCAACCAGC