Insertion junction: CLIP2.004085_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004085
Chromosome:chromosome 9
Location:5740699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410700 MDN5,MDH5 (1 of 1) 1.1.1.82 - Malate dehydrogenase (NADP(+)) / NADP-linked malate dehydrogenase; NADP-Malate Dehydrogenase 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTAGTCGCCGTCGCCCTTGGAGCTGCGGACAGTTGGCGGAGAGTGGGT
Internal bar code:CTTTCGAGTTTAATTATGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1106
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGAGAGGAGAGGGAA
Suggested primer 2:CAGTGCAGTGCCTCCAAAAC