Insertion junction: CLIP2.004096_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004096
Chromosome:chromosome 11
Location:3326552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476650 PUL1,PU1 Pullulanase-type starch debranching enzyme 1; (1 of 1) 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCGCATGTATCTGTACCGTTTGCTTTGTTTGTTGCTATGCTGC
Internal bar code:TCACATAAAAGAATTTAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCCCCATCCCCAATTA
Suggested primer 2:GCTACTACACCTACCGCGTC