Insertion junction: CLIP2.004101_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004101
Chromosome:chromosome 1
Location:2700553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGCGCGTGGTTTTGGGCCGGGAAATGGAGGGGGAGGGGCGCCACTAC
Internal bar code:GCTTTATGAGGGATTCAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:55.8824
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCGCCTTTGCTTCTTT
Suggested primer 2:CACCGAGTCTATGAGGTCGC