Insertion junction: CLIP2.004104_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004104
Chromosome:chromosome 7
Location:2241175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327450 DNJ34 DnaJ-like protein; (1 of 1) PTHR24078//PTHR24078:SF201 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGCGATTCATACAGTAGCTGCGGGGCCTTGGCAAATGTTGTGAAGA
Internal bar code:AAGAAGTGTCCGACACTCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1338
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCTCTCGGCAAGTCTC
Suggested primer 2:AGAAAAGGGTGGGCTTACCG