Insertion junction: CLIP2.004105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004105
Chromosome:chromosome 12
Location:1597652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487100 TSM2 Methionyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF89 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // METHIONYL-TRNA SYNTHETASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAGGCATCAAACTAGACGTGCTGCGCAGCTGTGCACACGATAGTGC
Internal bar code:TTTTGAAAGACGTTACTTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGCGCTTATCAGTAGAG
Suggested primer 2:AGCATGTGTCGCCTTGAAGA