Insertion junction: CLIP2.004105_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004105
Chromosome:chromosome 12
Location:1597654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487100 TSM2 Methionyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF89 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // METHIONYL-TRNA SYNTHETASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCCGAGGCCATAGTCGAACCCATTGCGTGGCTTCGATTGCCCACCA
Internal bar code:ATTAGTTCTCAATCGTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGTGTCGCCTTGAAGA
Suggested primer 2:CCGGGCGCTTATCAGTAGAG