Insertion junction: CLIP2.004111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004111
Chromosome:chromosome 17
Location:4485087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731100 CPL14 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATGTCTGGAGCAGAGGGCCGGTCCGCCACTTCGTCAGCCCCTAGCC
Internal bar code:CGGATCTTTACAGTGGAATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCACCTTCACTTGCAG
Suggested primer 2:ACTGAGCGAGTGTGTGTCTG