Insertion junction: CLIP2.004114_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004114
Chromosome:chromosome 6
Location:1917149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264350 PRPL13 (1 of 1) PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC; Chloroplast ribosomal protein L13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTAGGGCCTGACCTTGGTCCTGTGGTTGCCGGCCCACAGCGAGCGCC
Internal bar code:ACTCGCCTCTTCATGATAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2727
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCCATCGAGGGGGTGTA
Suggested primer 2:TTCCCATCTTACCACACGGC