Insertion junction: CLIP2.004116_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004116
Chromosome:chromosome 9
Location:1472989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399914 SSA8 cilia-sensing, structure and/or assembly; (1 of 1) K10766 - alkylated DNA repair protein alkB homolog 4 (ALKBH4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGAAATGCGTTAAGGGTGCACGCTCAATAGGCTCGCCTGACCGTTGA
Internal bar code:TCGCAGGCGCTCATGCAAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3434
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTGTGCGTCATTCAGA
Suggested primer 2:TCATGTGGAATTGGTGCCGA