Insertion junction: CLIP2.004120_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004120
Chromosome:chromosome 3
Location:4155859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTCCGCTTAGTGCCGCCGGCAGCCAAAGGGACAGAAGAGAGCGGGTG
Internal bar code:GCCAATGGTGTATTTGCACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4118
LEAP-Seq percent confirming:84.9315
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCTTCGGAGTCCATCG
Suggested primer 2:TTGTCGGTGCCTTCTAGCAG