Insertion junction: CLIP2.004125_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004125
Chromosome:chromosome 7
Location:2779009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331500 CLPR3 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATGGCACTGCCACTCGATGACAGACGACCGGACGCCAGCATTTGCA
Internal bar code:CCACATGTCAGCGCAGACATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1886
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGATGCGCATGTCCTCC
Suggested primer 2:GTATCCGCGACATGTACGGT