Insertion junction: CLIP2.004125_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004125
Chromosome:chromosome 7
Location:2779048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331500 CLPR3 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACTCAACAGCGAACCAGAAGCGGCCGCGCCGCCTTACGAGCGTCAGG
Internal bar code:CCACATGTCAGCGCAGACATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCGCGACATGTACGGT
Suggested primer 2:TAGTGATGCGCATGTCCTCC