Insertion junction: CLIP2.004130_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004130
Chromosome:chromosome 16
Location:6442766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCCCTGGCGCCACCGCTGCCACTGCGGCCCTGGTGGTGCTGAATGCT
Internal bar code:CAGATGCGCGTGTCAAGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2908
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTACGAGGCACCTTTCT
Suggested primer 2:GCACGAGATCCTGAGGTAGC