Insertion junction: CLIP2.004132_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004132
Chromosome:chromosome 7
Location:803856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318200 CGLD34 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; histone methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTAGCTGGCAGCTGCGAGGTGCGACTCCCACGCCTCAGCAGCCTCCG
Internal bar code:TACATGTTTTCTTTCTTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2862
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCGATGACGTGTCCAA
Suggested primer 2:CGAAGACGATGCCTACGTGA