Insertion junction: CLIP2.004138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004138
Chromosome:chromosome 2
Location:1311976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082550 ZEP,ZEP1 Zeaxanthin epoxidase 1; (1 of 1) K09838 - zeaxanthin epoxidase (ZEP, ABA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGCGGGGTGTGCTATGAGTGTGGAAACACTATGTCGCGTGTCGTGCT
Internal bar code:GGAGTGAGGCGTACGTAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3489
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAGGACTCACTGTGCG
Suggested primer 2:TGGGAGGAATGGGAGGAGAG