Insertion junction: CLIP2.004139_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004139
Chromosome:chromosome 5
Location:2794923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241000 (1 of 2) PF10084 - Uncharacterized protein conserved in bacteria (DUF2322) (DUF2322) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGGGAGCGAGCGAGGAGGGGGACTGGGATTGGACGGTGCTGTGCCC
Internal bar code:TGAGCAATGTCGGCTCTCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2156
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGAGAGAATACGGCGG
Suggested primer 2:TCTCGTGCTCCCTCAAACAC