Insertion junction: CLIP2.004142_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004142
Chromosome:chromosome 17
Location:3823404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTTGCCCAATCCTGCAGGTAAGGACCGCAGTGCTGCTGCGCGTGCC
Internal bar code:TATCCGAGCGGATGCGAAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTATGCCGCTTAACGC
Suggested primer 2:AGACGACATCAAAGCCTGCA