Insertion junction: CLIP2.004144_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004144
Chromosome:chromosome 7
Location:5250262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349300 HEL41 (1 of 2) PTHR24031//PTHR24031:SF303 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL; DEAD box ATP-dependent RNA helicase 3'UTR
Cre07.g349350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACTCCCCATGACCTGAATAGTTAGGCTTGACCCAGATATCGTCATT
Internal bar code:GTTTCCTAAGAGCCTCATCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1275
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGGCATCGCAATTAAG
Suggested primer 2:TGTTCGGGGCTTGATGACTC