Insertion junction: CLIP2.004146_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004146
Chromosome:chromosome 6
Location:2856813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272300 CPLD57 (1 of 1) PTHR23029:SF45 - PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN; Phosphoglycerate mutase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTTCCCCAGACTTCCTGCCCCATCCCTCCTTCCTCCAACACGTCTC
Internal bar code:TGGATTGGGTGAGGAGACATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CATAACAGCCAGCATGTCGC
Suggested primer 2:GCAGTAGGGTCCTTCCATCG