Insertion junction: CLIP2.004153_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004153
Chromosome:chromosome 5
Location:813590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245900 BCA2 (1 of 1) PTHR11825//PTHR11825:SF46 - SUBGROUP IIII AMINOTRANSFERASE // BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 3, CHLOROPLASTIC; Branched-chain amino acid aminotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACTATCCCTCCCTCTCCCCATCCCAAAATCTCCCGCCCCTCTGCAGT
Internal bar code:TAGTGGTAGATTTTATTGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAATGCAGGTGCTCAAC
Suggested primer 2:TTGAAGAAACAAGCCTGCGC