Insertion junction: CLIP2.004158_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004158
Chromosome:chromosome 5
Location:378169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGTGCGGATGCCAGGATAGTCCCAGCACACGTGTAGTGCCGACCAGT
Internal bar code:AGGATCGCAATACGAAATAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3749
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAATGCTACCCACGAA
Suggested primer 2:CCATTCAAGGTGCGCTATGC