Insertion junction: CLIP2.004159_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004159
Chromosome:chromosome 10
Location:2518721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436000 POC2 Proteome of centriole protein 2; (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED intron
Cre10.g436050 FSD1 Fe superoxide dismutase; (1 of 1) PTHR11404//PTHR11404:SF8 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTTCTTTGACCACTCCCCCAGATCATGCACTGCTTCCAATTTTGTCG
Internal bar code:AATCGAGTCGTGTATTATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3475
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGGACCGAAAGACAACG
Suggested primer 2:CTACGCTCTGGATGCTCTGG