Insertion junction: CLIP2.004166_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004166
Chromosome:chromosome 16
Location:4368225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668650 (1 of 1) PTHR34204//PTHR34204:SF2 - FAMILY NOT NAMED // RNA-BINDING ASCH DOMAIN PROTEIN 3'UTR
Cre16.g668700 (1 of 37) IPR009030 - Insulin-like growth factor binding protein, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGTTACATGTAACCTTATCCATCAAGGATTGAAGTCACGGATTGAAG
Internal bar code:TTCGGTGGCTATAAATGCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACTATGACAGTAGCGGC
Suggested primer 2:ATCGCACATATTCCCGGCAT