Insertion junction: CLIP2.004169_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004169
Chromosome:chromosome 10
Location:3548089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445100 CGL50 (1 of 1) PTHR13068:SF26 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACGTACAGTATGGCAGGTACTCGGCATACCGATCGCGACGCTTGCTT
Internal bar code:GCGGCGATATCGTGCTCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGTTTGTGGTCCGCTG
Suggested primer 2:AGTCAACACTGTAGCCCAGC