Insertion junction: CLIP2.004170_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004170
Chromosome:chromosome 8
Location:3153253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376300 LIL5, SEP2 Stress Enhanced Protein 2; (1 of 45) IPR023329 - Chlorophyll a/b binding protein domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGAGCGCCGCTTTGACAGCTTCAGCATTGAGGGCCTGTTGGCGGCTT
Internal bar code:GATAAACATTTCTTTTGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCAATTGATGTCGGCG
Suggested primer 2:CGTAGGGTAGCAACTTGGCA