Insertion junction: CLIP2.004181_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004181
Chromosome:chromosome 9
Location:3877760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397956 ELG40,FAP201 Exostosin-like glycosyltransferase 40; (1 of 39) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGACCTACTGCGGTACAGGTGGGCGTGGGCAGGAGGGAGGTGGGGT
Internal bar code:CTGATGACTTTGAGTGTTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATGGGGGAGTGCAGTA
Suggested primer 2:AACCGAGGGTGTGTGTTTGT